STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FixBCOG2025 Electron transfer flavoprotein, alpha subunit. (319 aa)    
Predicted Functional Partners:
FixA
COG2086 Electron transfer flavoprotein, beta subunit.
 0.999
FadH
NADPH-dependent 2,4-dienoyl-CoA reductase; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.917
RAM_05075
COG1960 Acyl-CoA dehydrogenases.
 
 0.868
RAM_43275
COG1960 Acyl-CoA dehydrogenases.
 
 0.868
RAM_40710
COG1960 Acyl-CoA dehydrogenases.
 
 0.866
RAM_19715
COG1960 Acyl-CoA dehydrogenases.
 
 0.858
RAM_36560
COG1960 Acyl-CoA dehydrogenases.
 
 0.858
RAM_19600
COG1960 Acyl-CoA dehydrogenases.
 
 0.840
Acd-9
COG1960 Acyl-CoA dehydrogenases.
 
 0.836
Acd-13
COG1960 Acyl-CoA dehydrogenases.
 
 0.832
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.