STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BglXCOG1472 Beta-glucosidase-related glycosidases. (671 aa)    
Predicted Functional Partners:
RAM_26445
COG5297 Cellobiohydrolase A (1,4-beta-cellobiosidase A); Belongs to the glycosyl hydrolase family 6.
     
 0.903
RAM_04785
COG1472 Beta-glucosidase-related glycosidases.
  
  
 
0.748
RAM_06570
COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.747
RAM_38915
COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.747
RAM_20035
COG2730 Endoglucanase.
  
  
 0.746
RAM_22145
COG1472 Beta-glucosidase-related glycosidases.
  
  
 
0.746
RAM_20400
COG1472 Beta-glucosidase-related glycosidases.
  
  
0.741
BglX-4
COG1472 Beta-glucosidase-related glycosidases.
  
  
 
0.732
RAM_37330
COG1472 Beta-glucosidase-related glycosidases.
  
  
 
0.719
RAM_44210
COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.717
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.