| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RAM_09105 | rnc | RAM_09105 | RAM_09115 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.855 |
| RAM_09105 | rplM | RAM_09105 | RAM_03705 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.829 |
| RAM_09105 | rplU | RAM_09105 | RAM_34400 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.822 |
| RAM_09105 | rpmB | RAM_09105 | RAM_08890 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.938 |
| RAM_09105 | rpmF | RAM_09105 | RAM_09110 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.979 |
| RAM_09105 | rpmI | RAM_09105 | RAM_31045 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.821 |
| RAM_09105 | rpsA | RAM_09105 | RAM_13510 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | COG0539 Ribosomal protein S1. | 0.820 |
| RAM_09105 | rpsC | RAM_09105 | RAM_03490 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.894 |
| RAM_09105 | rpsF | RAM_09105 | RAM_47670 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.849 |
| RAM_09105 | rpsP | RAM_09105 | RAM_09930 | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.837 |
| rnc | RAM_09105 | RAM_09115 | RAM_09105 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | 0.855 |
| rnc | rplM | RAM_09115 | RAM_03705 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.842 |
| rnc | rplU | RAM_09115 | RAM_34400 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.796 |
| rnc | rpmB | RAM_09115 | RAM_08890 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.797 |
| rnc | rpmF | RAM_09115 | RAM_09110 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.962 |
| rnc | rpsC | RAM_09115 | RAM_03490 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.776 |
| rnc | rpsF | RAM_09115 | RAM_47670 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.805 |
| rnc | rpsP | RAM_09115 | RAM_09930 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.822 |
| rplM | RAM_09105 | RAM_03705 | RAM_09105 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | 0.829 |
| rplM | rnc | RAM_03705 | RAM_09115 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.842 |
