STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RAM_09175Anthranilate synthase component II; COG2071 Predicted glutamine amidotransferases. (234 aa)    
Predicted Functional Partners:
GlnA4-1
Glutamine synthetase-like protein; COG0174 Glutamine synthetase.
 
  
 0.941
RAM_44165
COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
     0.887
FeaB
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
  
 0.851
RAM_09185
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.849
GlnA4-2
Glutamine synthetase-like protein; COG0174 Glutamine synthetase.
 
  
 0.561
GlnA3-2
Glutamine synthetase-like protein; COG0174 Glutamine synthetase.
 
  
 0.523
RAM_09165
Hypothetical protein.
       0.478
nnrD
Ribokinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NA [...]
       0.466
GlnA2
COG0174 Glutamine synthetase.
  
  
 0.456
GlnA
COG0174 Glutamine synthetase.
  
  
 0.456
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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