Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RAM_09900 | RAM_09905 | RAM_09900 | RAM_09905 | COG1846 Transcriptional regulators. | COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.776 |
| RAM_09900 | RAM_09915 | RAM_09900 | RAM_09915 | COG1846 Transcriptional regulators. | Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. | 0.497 |
| RAM_09900 | RAM_09920 | RAM_09900 | RAM_09920 | COG1846 Transcriptional regulators. | Integral membrane protein; COG1266 Predicted metal-dependent membrane protease. | 0.414 |
| RAM_09900 | ffh | RAM_09900 | RAM_09910 | COG1846 Transcriptional regulators. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.508 |
| RAM_09905 | RAM_09900 | RAM_09905 | RAM_09900 | COG1132 ABC-type multidrug transport system, ATPase and permease components. | COG1846 Transcriptional regulators. | 0.776 |
| RAM_09905 | RAM_09915 | RAM_09905 | RAM_09915 | COG1132 ABC-type multidrug transport system, ATPase and permease components. | Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. | 0.494 |
| RAM_09905 | RAM_09920 | RAM_09905 | RAM_09920 | COG1132 ABC-type multidrug transport system, ATPase and permease components. | Integral membrane protein; COG1266 Predicted metal-dependent membrane protease. | 0.409 |
| RAM_09905 | ffh | RAM_09905 | RAM_09910 | COG1132 ABC-type multidrug transport system, ATPase and permease components. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.529 |
| RAM_09915 | RAM_09900 | RAM_09915 | RAM_09900 | Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. | COG1846 Transcriptional regulators. | 0.497 |
| RAM_09915 | RAM_09905 | RAM_09915 | RAM_09905 | Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. | COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.494 |
| RAM_09915 | RAM_09920 | RAM_09915 | RAM_09920 | Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. | Integral membrane protein; COG1266 Predicted metal-dependent membrane protease. | 0.638 |
| RAM_09915 | ffh | RAM_09915 | RAM_09910 | Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.801 |
| RAM_09920 | RAM_09900 | RAM_09920 | RAM_09900 | Integral membrane protein; COG1266 Predicted metal-dependent membrane protease. | COG1846 Transcriptional regulators. | 0.414 |
| RAM_09920 | RAM_09905 | RAM_09920 | RAM_09905 | Integral membrane protein; COG1266 Predicted metal-dependent membrane protease. | COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.409 |
| RAM_09920 | RAM_09915 | RAM_09920 | RAM_09915 | Integral membrane protein; COG1266 Predicted metal-dependent membrane protease. | Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. | 0.638 |
| RAM_09920 | ffh | RAM_09920 | RAM_09910 | Integral membrane protein; COG1266 Predicted metal-dependent membrane protease. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.656 |
| ffh | RAM_09900 | RAM_09910 | RAM_09900 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | COG1846 Transcriptional regulators. | 0.508 |
| ffh | RAM_09905 | RAM_09910 | RAM_09905 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.529 |
| ffh | RAM_09915 | RAM_09910 | RAM_09915 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. | 0.801 |
| ffh | RAM_09920 | RAM_09910 | RAM_09920 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Integral membrane protein; COG1266 Predicted metal-dependent membrane protease. | 0.656 |