Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RAM_10905Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (164 aa)    
Predicted Functional Partners:
RAM_10910
COG1846 Transcriptional regulators.
 
     0.717
RAM_02275
2-haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily).
 
     0.555
RAM_28665
Haloacid dehalogenase; COG0637 Predicted phosphatase/phosphohexomutase.
 
     0.545
RAM_10895
Hypothetical protein.
       0.513
SmvA
COG0477 Permeases of the major facilitator superfamily.
       0.513
RAM_09885
COG1309 Transcriptional regulator.
 
     0.503
RAM_18120
COG1309 Transcriptional regulator.
 
     0.497
RAM_25140
COG1309 Transcriptional regulator.
 
     0.492
RAM_10725
COG1309 Transcriptional regulator.
 
     0.479
RAM_18050
COG1309 Transcriptional regulator.
 
     0.432
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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