STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AnsPL-asparagine permease AnsP; COG1113 Gamma-aminobutyrate permease and related permeases. (476 aa)    
Predicted Functional Partners:
aspA
COG1027 Aspartate ammonia-lyase.
     
 0.828
AnsA-2
COG4448 L-asparaginase II.
       0.786
RAM_10965
COG2186 Transcriptional regulators.
     
 0.779
RAM_10945
Peptidase S15; COG2936 Predicted acyl esterases.
       0.618
RAM_38840
COG0531 Amino acid transporters.
 
  
 0.420
RAM_13410
COG0531 Amino acid transporters.
 
  
 0.400
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.