STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_11285Carbonic anhydrase fused with sulfate permease; COG0659 Sulfate permease and related transporters (MFS superfamily). (727 aa)    
Predicted Functional Partners:
RAM_11280
Carbonic anhydrase fused with sulfate permease; COG0659 Sulfate permease and related transporters (MFS superfamily).
 
 
0.968
CynT
COG0288 Carbonic anhydrase.
  
 
 0.921
CynT-2
COG0288 Carbonic anhydrase.
  
 
 0.921
NuoM
COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
  
 
 0.805
RAM_20005
Polyketide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.759
RifB
COG3321 Polyketide synthase modules and related proteins.
  
 
 0.725
RAM_30750
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.681
NirC
COG2116 Formate/nitrite family of transporters.
  
  
 0.668
cysC
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
  
 0.660
NuoL
COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
  
  
 0.623
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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