STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_11315ATP-dependent protease Lon; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. (238 aa)    
Predicted Functional Partners:
RAM_11320
NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase.
       0.702
MoeZ
Molybdopterin biosynthesis-like protein MoeZ; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
    
 0.546
RAM_06300
Hypothetical protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
    
 0.546
RAM_10870
UBA/ThiF-type NAD/FAD binding protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
    
 0.546
NadA
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.527
RAM_09000
Hypothetical protein; COG0439 Biotin carboxylase.
  
 
 0.508
RAM_08985
RCC1 domain-containing protein; COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins.
  
 
  0.496
RAM_08995
Hypothetical protein.
  
 
 0.491
RAM_03125
Hypothetical protein.
  
 
 0.478
RAM_08715
Exonuclease SbcC; COG0419 ATPase involved in DNA repair.
    
 0.475
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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