Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NadA | NadB | RAM_11325 | RAM_11330 | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.999 |
| NadA | NadC | RAM_11325 | RAM_11335 | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.999 |
| NadA | RAM_11315 | RAM_11325 | RAM_11315 | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | ATP-dependent protease Lon; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | 0.527 |
| NadA | RAM_11320 | RAM_11325 | RAM_11320 | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | 0.817 |
| NadB | NadA | RAM_11330 | RAM_11325 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.999 |
| NadB | NadC | RAM_11330 | RAM_11335 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.999 |
| NadB | RAM_11315 | RAM_11330 | RAM_11315 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | ATP-dependent protease Lon; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | 0.442 |
| NadB | RAM_11320 | RAM_11330 | RAM_11320 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | 0.662 |
| NadC | NadA | RAM_11335 | RAM_11325 | COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.999 |
| NadC | NadB | RAM_11335 | RAM_11330 | COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.999 |
| NadC | RAM_11315 | RAM_11335 | RAM_11315 | COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | ATP-dependent protease Lon; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | 0.425 |
| NadC | RAM_11320 | RAM_11335 | RAM_11320 | COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | 0.687 |
| RAM_01890 | RAM_11320 | RAM_01890 | RAM_11320 | DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | 0.755 |
| RAM_11315 | NadA | RAM_11315 | RAM_11325 | ATP-dependent protease Lon; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.527 |
| RAM_11315 | NadB | RAM_11315 | RAM_11330 | ATP-dependent protease Lon; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.442 |
| RAM_11315 | NadC | RAM_11315 | RAM_11335 | ATP-dependent protease Lon; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.425 |
| RAM_11315 | RAM_11320 | RAM_11315 | RAM_11320 | ATP-dependent protease Lon; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | 0.702 |
| RAM_11320 | NadA | RAM_11320 | RAM_11325 | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.817 |
| RAM_11320 | NadB | RAM_11320 | RAM_11330 | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.662 |
| RAM_11320 | NadC | RAM_11320 | RAM_11335 | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.687 |
page 1 of 2