STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_11640Hypothetical protein. (55 aa)    
Predicted Functional Partners:
RAM_11645
XRE family transcriptional regulator.
 
     0.795
RAM_34850
COG1396 Predicted transcriptional regulators.
  
     0.643
AcpP
COG0236 Acyl carrier protein.
  
     0.533
RAM_44105
SARP family transcriptional regulator; COG0457 FOG: TPR repeat.
  
     0.529
RAM_01085
Hypothetical protein.
  
     0.516
RAM_40585
NB-ARC domain-containing protein; COG0457 FOG: TPR repeat.
  
     0.503
RAM_40595
Hypothetical protein.
  
     0.492
RAM_40590
ATPase AAA; COG0714 MoxR-like ATPases.
  
     0.487
RAM_11985
COG1396 Predicted transcriptional regulators.
 
   
 0.478
RAM_01080
Acyl-protein synthetase.
  
     0.474
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.