Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RAM_11930 | RAM_45740 | RAM_11930 | RAM_45740 | Hypothetical protein. | IS3 family transposase; COG2801 Transposase and inactivated derivatives. | 0.504 |
| RAM_11930 | pyrD | RAM_11930 | RAM_32195 | Hypothetical protein. | Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.448 |
| RAM_11930 | recA | RAM_11930 | RAM_11920 | Hypothetical protein. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.542 |
| RAM_11930 | recX | RAM_11930 | RAM_11925 | Hypothetical protein. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.783 |
| RAM_45740 | RAM_11930 | RAM_45740 | RAM_11930 | IS3 family transposase; COG2801 Transposase and inactivated derivatives. | Hypothetical protein. | 0.504 |
| pyrD | RAM_11930 | RAM_32195 | RAM_11930 | Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Hypothetical protein. | 0.448 |
| recA | RAM_11930 | RAM_11920 | RAM_11930 | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Hypothetical protein. | 0.542 |
| recA | recX | RAM_11920 | RAM_11925 | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.996 |
| recX | RAM_11930 | RAM_11925 | RAM_11930 | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | Hypothetical protein. | 0.783 |
| recX | recA | RAM_11925 | RAM_11920 | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.996 |