close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (288 aa)    
Predicted Functional Partners:
RAM_12790
COG2030 Acyl dehydratase.
 0.959
RAM_12335
3-alpha(or 20-beta)-hydroxysteroid dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
    
0.837
RAM_12320
COG1960 Acyl-CoA dehydrogenases.
 
  0.753
FabG-12
3-oxoacyl-[acyl-carrier-protein] reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.733
RAM_12770
Hypothetical protein.
 
 0.726
AtoB-3
COG0183 Acetyl-CoA acetyltransferase.
 
 
 0.672
RAM_17230
COG1960 Acyl-CoA dehydrogenases.
 
  0.672
RAM_12315
COG1960 Acyl-CoA dehydrogenases.
 
  0.653
RAM_17190
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
 
 0.645
RAM_12775
Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase.
 
 
 0.641
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.