STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TesBCOG1946 Acyl-CoA thioesterase. (295 aa)    
Predicted Functional Partners:
TesB-2
COG1946 Acyl-CoA thioesterase.
  
  
 
0.913
TesB-3
COG1946 Acyl-CoA thioesterase.
  
  
 
0.905
Pyk
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.668
RAM_18305
Epoxide hydrolase MesT; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
  
  0.474
RAM_12550
Hypothetical protein.
       0.459
RAM_12790
COG2030 Acyl dehydratase.
  
 
 0.433
RAM_15975
Nodulation protein N; COG2030 Acyl dehydratase.
  
 
 0.427
RAM_19705
Dehydratase; COG2030 Acyl dehydratase.
  
 
 0.420
FadB-3
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.420
Acd-4
COG1960 Acyl-CoA dehydrogenases.
  
 
 0.413
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.