STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_12740Hypothetical protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins; Belongs to the long-chain O-acyltransferase family. (461 aa)    
Predicted Functional Partners:
RAM_09280
Short chain dehydrogenase; COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes.
 
  
 0.950
RAM_41680
Short chain dehydrogenase; COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes.
 
  
 0.942
UgtP
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
     
 0.901
RAM_24840
COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
     
  0.900
RAM_12735
Alpha/beta hydrolase; COG0657 Esterase/lipase.
 
     0.621
RAM_02410
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
   0.579
GalE-2
UDP-glucose 4-epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
    0.532
RAM_25535
COG1309 Transcriptional regulator.
  
    0.483
RAM_10620
COG1309 Transcriptional regulator.
  
    0.438
RAM_10610
COG3239 Fatty acid desaturase.
  
   
 0.417
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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