STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_13200COG3281 Uncharacterized protein, probably involved in trehalose biosynthesis. (459 aa)    
Predicted Functional Partners:
glgE
Alpha amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
 0.999
RAM_13195
Trehalose synthase; COG0366 Glycosidases.
 0.999
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.997
MalZ-2
Alpha-glucosidase; COG0366 Glycosidases.
 0.994
MalZ-4
Alpha-glucosidase; COG0366 Glycosidases.
 0.994
MalZ-3
Alpha-glucosidase; COG0366 Glycosidases.
 0.989
MalQ
COG1640 4-alpha-glucanotransferase.
 
 
 0.985
RAM_22735
COG0438 Glycosyltransferase.
  
  
 0.940
RAM_13180
Maltooligosyltrehalose trehalohydrolase; COG0296 1,4-alpha-glucan branching enzyme.
  
 0.937
TreY
COG3280 Maltooligosyl trehalose synthase.
 
  
 0.935
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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