STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_14550Hypothetical protein. (69 aa)    
Predicted Functional Partners:
RAM_38545
Sporulation and cell division protein SsgA; COG0571 dsRNA-specific ribonuclease.
  
   
 0.700
RAM_04190
Hypothetical protein.
  
     0.684
RAM_14545
ABC transport system ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
  
    0.653
RAM_01885
Sporulation and cell division protein SsgA.
  
     0.639
RAM_01335
Sporulation and cell division protein SsgA.
  
   
 0.630
RAM_46230
Hypothetical protein.
  
     0.627
RAM_31620
Sporulation and cell division protein SsgA.
  
     0.617
RAM_13950
COG1396 Predicted transcriptional regulators.
  
   
 0.602
RAM_27150
Sporulation and cell division protein SsgA.
  
   
 0.594
RAM_08490
ACT domain-containing protein.
  
     0.573
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.