STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_14575COG1680 Beta-lactamase class C and other penicillin binding proteins. (386 aa)    
Predicted Functional Partners:
RAM_22535
COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.564
RAM_12310
COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.563
RAM_14065
COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.560
RAM_18065
COG1680 Beta-lactamase class C and other penicillin binding proteins; Belongs to the class-A beta-lactamase family.
  
     0.559
RAM_46610
COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.520
RAM_18760
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.519
RAM_18765
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.519
RAM_27510
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.519
RAM_14580
COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain.
       0.500
RAM_15785
COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.446
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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