STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_15800COG2124 Cytochrome P450. (401 aa)    
Predicted Functional Partners:
RAM_18760
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.973
RAM_18765
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.973
RAM_27510
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.973
RAM_18750
Hypothetical protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.842
RAM_24435
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.836
RAM_31995
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.815
RAM_15790
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
   0.798
RAM_22825
COG3321 Polyketide synthase modules and related proteins.
  
 0.788
RAM_15795
COG0477 Permeases of the major facilitator superfamily.
       0.773
RAM_15775
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.714
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.