STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_16335COG3335 Transposase and inactivated derivatives. (363 aa)    
Predicted Functional Partners:
RAM_16340
COG1680 Beta-lactamase class C and other penicillin binding proteins.
       0.578
RAM_25715
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
 
    0.469
RAM_16345
COG0474 Cation transport ATPase.
  
    0.417
RAM_07310
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
 
    0.401
RAM_07370
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
 
    0.401
RAM_28130
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
 
    0.401
RAM_29810
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
 
    0.401
RAM_37655
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
 
    0.401
RAM_40135
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
 
    0.401
RAM_40645
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
 
    0.401
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.