STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_17305Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (299 aa)    
Predicted Functional Partners:
RAM_17315
Hypothetical protein.
 
     0.898
RAM_17310
COG2764 Uncharacterized protein conserved in bacteria.
       0.794
RAM_30795
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.693
RAM_38305
O-methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.609
GalA-5
Alpha-galactosidase.
       0.529
RAM_28730
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.471
RAM_40775
Glyoxalase/bleomycin resistance protein/dioxygenase; COG2764 Uncharacterized protein conserved in bacteria.
  
     0.419
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.