STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_17555Nucleotide-diphosphate-sugar epimerase/NmrA family protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. (284 aa)    
Predicted Functional Partners:
NuoF-2
COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
   
 0.947
RAM_33405
Nucleotide-diphosphate-sugar epimerase/NmrA family protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
  
 
0.922
RAM_15580
Nucleotide-diphosphate-sugar epimerase/NmrA family protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
  
 
0.916
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
     
  0.900
WrbA
TrpR binding protein WrbA; COG0655 Multimeric flavodoxin WrbA; Belongs to the WrbA family.
    
  0.900
RAM_05110
Nucleotide-diphosphate-sugar epimerase/NmrA family protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
     0.771
RAM_32050
Nucleotide-diphosphate-sugar epimerase/NmrA family protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
     0.770
RAM_32730
Nucleotide-diphosphate-sugar epimerase/NmrA family protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
     0.770
RAM_34905
Nucleotide-diphosphate-sugar epimerase/NmrA family protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
     0.767
RAM_18175
Nucleotide-diphosphate-sugar epimerase/NmrA family protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
     0.759
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.