Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| RAM_05320 | RAM_18410 | Hypothetical protein. | COG3409 Putative peptidoglycan-binding domain-containing protein. | 0.584 |
| RAM_05320 | RAM_24575 | Hypothetical protein. | Hypothetical protein; COG0372 Citrate synthase. | 0.582 |
| RAM_05320 | RAM_44005 | Hypothetical protein. | Lipoprotein. | 0.479 |
| RAM_10870 | RAM_18410 | UBA/ThiF-type NAD/FAD binding protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2. | COG3409 Putative peptidoglycan-binding domain-containing protein. | 0.537 |
| RAM_10870 | RAM_26285 | UBA/ThiF-type NAD/FAD binding protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2. | Hypothetical protein. | 0.558 |
| RAM_15640 | RAM_18410 | Hypothetical protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family. | COG3409 Putative peptidoglycan-binding domain-containing protein. | 0.584 |
| RAM_15640 | RAM_18730 | Hypothetical protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family. | Endoglucanase E-like hydrolase; COG2755 Lysophospholipase L1 and related esterases. | 0.756 |
| RAM_15640 | RAM_38210 | Hypothetical protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family. | Hypothetical protein. | 0.513 |
| RAM_18410 | RAM_05320 | COG3409 Putative peptidoglycan-binding domain-containing protein. | Hypothetical protein. | 0.584 |
| RAM_18410 | RAM_10870 | COG3409 Putative peptidoglycan-binding domain-containing protein. | UBA/ThiF-type NAD/FAD binding protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2. | 0.537 |
| RAM_18410 | RAM_15640 | COG3409 Putative peptidoglycan-binding domain-containing protein. | Hypothetical protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family. | 0.584 |
| RAM_18410 | RAM_18730 | COG3409 Putative peptidoglycan-binding domain-containing protein. | Endoglucanase E-like hydrolase; COG2755 Lysophospholipase L1 and related esterases. | 0.514 |
| RAM_18410 | RAM_24575 | COG3409 Putative peptidoglycan-binding domain-containing protein. | Hypothetical protein; COG0372 Citrate synthase. | 0.492 |
| RAM_18410 | RAM_26285 | COG3409 Putative peptidoglycan-binding domain-containing protein. | Hypothetical protein. | 0.580 |
| RAM_18410 | RAM_29855 | COG3409 Putative peptidoglycan-binding domain-containing protein. | Transposase IS4 family protein. | 0.591 |
| RAM_18410 | RAM_31450 | COG3409 Putative peptidoglycan-binding domain-containing protein. | Hypothetical protein. | 0.534 |
| RAM_18410 | RAM_38210 | COG3409 Putative peptidoglycan-binding domain-containing protein. | Hypothetical protein. | 0.513 |
| RAM_18410 | RAM_44005 | COG3409 Putative peptidoglycan-binding domain-containing protein. | Lipoprotein. | 0.493 |
| RAM_18730 | RAM_15640 | Endoglucanase E-like hydrolase; COG2755 Lysophospholipase L1 and related esterases. | Hypothetical protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family. | 0.756 |
| RAM_18730 | RAM_18410 | Endoglucanase E-like hydrolase; COG2755 Lysophospholipase L1 and related esterases. | COG3409 Putative peptidoglycan-binding domain-containing protein. | 0.514 |
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