STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AcpP-3COG0236 Acyl carrier protein. (85 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
     
  0.900
AcpP-2
Acyl carrier protein.
     
  0.900
AcpP-4
COG0236 Acyl carrier protein.
     
  0.900
RAM_20540
COG0236 Acyl carrier protein.
     
 
0.900
AcpP-5
COG0236 Acyl carrier protein.
     
  0.900
RAM_21290
Acyl carrier protein; COG3321 Polyketide synthase modules and related proteins.
     
  0.900
AcpP-6
COG0236 Acyl carrier protein.
     
  0.900
NuoF-2
COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
  
 0.887
AcpS
COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); Belongs to the P-Pant transferase superfamily.
  
 
 0.871
RAM_18465
COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III.
  
 
 0.815
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.