STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_18600Hypothetical protein. (256 aa)    
Predicted Functional Partners:
RAM_18605
COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
    0.773
RAM_47505
COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.728
RAM_47515
COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.613
RAM_33350
COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.607
RAM_43550
HSP90 family heat shock protein.
 
  
 0.606
RAM_06510
COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.590
RAM_33270
COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.577
RAM_14325
Hypothetical protein.
  
     0.556
RAM_00160
Hypothetical protein.
  
     0.555
RAM_16080
COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.548
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.