Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ApbE | RAM_08815 | RAM_08810 | RAM_08815 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | COG3976 Uncharacterized protein conserved in bacteria. | 0.955 |
| ApbE | RAM_18780 | RAM_08810 | RAM_18780 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | COG3976 Uncharacterized protein conserved in bacteria. | 0.802 |
| ApbE | RAM_18785 | RAM_08810 | RAM_18785 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Oxidoreductase; COG4097 Predicted ferric reductase. | 0.736 |
| ApbE-2 | MprA | RAM_18775 | RAM_18795 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.503 |
| ApbE-2 | MprB | RAM_18775 | RAM_18790 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | COG0642 Signal transduction histidine kinase. | 0.516 |
| ApbE-2 | RAM_08815 | RAM_18775 | RAM_08815 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | COG3976 Uncharacterized protein conserved in bacteria. | 0.816 |
| ApbE-2 | RAM_18770 | RAM_18775 | RAM_18770 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.678 |
| ApbE-2 | RAM_18780 | RAM_18775 | RAM_18780 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | COG3976 Uncharacterized protein conserved in bacteria. | 0.932 |
| ApbE-2 | RAM_18785 | RAM_18775 | RAM_18785 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Oxidoreductase; COG4097 Predicted ferric reductase. | 0.915 |
| MprA | ApbE-2 | RAM_18795 | RAM_18775 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.503 |
| MprA | MprB | RAM_18795 | RAM_18790 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG0642 Signal transduction histidine kinase. | 0.996 |
| MprA | RAM_18770 | RAM_18795 | RAM_18770 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Hypothetical protein. | 0.416 |
| MprA | RAM_18780 | RAM_18795 | RAM_18780 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG3976 Uncharacterized protein conserved in bacteria. | 0.598 |
| MprA | RAM_18785 | RAM_18795 | RAM_18785 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Oxidoreductase; COG4097 Predicted ferric reductase. | 0.623 |
| MprA | RAM_18800 | RAM_18795 | RAM_18800 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Hypothetical protein. | 0.518 |
| MprB | ApbE-2 | RAM_18790 | RAM_18775 | COG0642 Signal transduction histidine kinase. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.516 |
| MprB | MprA | RAM_18790 | RAM_18795 | COG0642 Signal transduction histidine kinase. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.996 |
| MprB | RAM_18770 | RAM_18790 | RAM_18770 | COG0642 Signal transduction histidine kinase. | Hypothetical protein. | 0.422 |
| MprB | RAM_18780 | RAM_18790 | RAM_18780 | COG0642 Signal transduction histidine kinase. | COG3976 Uncharacterized protein conserved in bacteria. | 0.598 |
| MprB | RAM_18785 | RAM_18790 | RAM_18785 | COG0642 Signal transduction histidine kinase. | Oxidoreductase; COG4097 Predicted ferric reductase. | 0.634 |
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