STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_20035COG2730 Endoglucanase. (891 aa)    
Predicted Functional Partners:
RAM_26455
COG5297 Cellobiohydrolase A (1,4-beta-cellobiosidase A).
 
     0.952
RAM_26445
COG5297 Cellobiohydrolase A (1,4-beta-cellobiosidase A); Belongs to the glycosyl hydrolase family 6.
 
  
  0.951
RAM_20400
COG1472 Beta-glucosidase-related glycosidases.
  
  
  0.827
RAM_38915
COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
  
  
  0.786
RAM_22145
COG1472 Beta-glucosidase-related glycosidases.
  
  
  0.767
RAM_04785
COG1472 Beta-glucosidase-related glycosidases.
  
  
  0.760
RAM_06570
COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
  
  
  0.758
BglX
COG1472 Beta-glucosidase-related glycosidases.
  
  
  0.741
BglX-3
Beta-glucosidase; COG3291 FOG: PKD repeat.
  
  
  0.740
BglX-4
COG1472 Beta-glucosidase-related glycosidases.
  
  
  0.723
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.