STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RAM_20350Endoglucanase; COG5297 Cellobiohydrolase A (1,4-beta-cellobiosidase A); Belongs to the glycosyl hydrolase family 6. (447 aa)    
Predicted Functional Partners:
RAM_26445
COG5297 Cellobiohydrolase A (1,4-beta-cellobiosidase A); Belongs to the glycosyl hydrolase family 6.
  
  
0.932
RAM_19085
SGNH hydrolase; COG2755 Lysophospholipase L1 and related esterases.
 
 
 0.747
AbfA-2
alpha-N-arabinofuranosidase; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
     0.713
RAM_38915
COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.700
RAM_22145
COG1472 Beta-glucosidase-related glycosidases.
  
  
 0.699
AbfA-10
alpha-N-arabinofuranosidase.
  
     0.668
BglB
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
    
 0.666
BglB-2
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
    
 0.666
BglB-3
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.666
BglB-4
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
    
 0.666
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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