STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_20865Hypothetical protein. (186 aa)    
Predicted Functional Partners:
RAM_20870
Activator of HSP90 ATPase.
     0.952
RAM_20875
COG0640 Predicted transcriptional regulators.
  
    0.784
RAM_20880
COG2730 Endoglucanase.
       0.511
RAM_21445
Hypothetical protein.
  
     0.502
RAM_20860
Hypothetical protein.
       0.450
RAM_06565
Hypothetical protein.
 
     0.433
RAM_10910
COG1846 Transcriptional regulators.
  
     0.424
RAM_40355
Cytoplasmic protein.
 
     0.414
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.