STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_21080Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. (164 aa)    
Predicted Functional Partners:
RAM_21090
Hypothetical protein.
 
     0.944
RAM_21085
Hypothetical protein.
       0.775
RAM_21095
Hypothetical protein.
       0.759
RAM_23025
Hypothetical protein.
  
     0.757
RAM_01780
Hypothetical protein.
  
     0.753
RAM_00615
Hypothetical protein.
  
     0.752
RAM_47215
Membrane-associated oxidoreductase.
  
     0.752
RAM_04055
Hypothetical protein.
  
     0.751
RAM_46580
Hypothetical protein.
  
     0.749
RAM_26315
Hypothetical protein.
  
     0.747
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.