STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_21265Hypothetical protein. (157 aa)    
Predicted Functional Partners:
RAM_46970
Flavohemoprotein; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; Belongs to the globin family.
  
  
 0.644
RAM_46975
Flavohemoprotein; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; Belongs to the globin family.
  
  
 0.644
RAM_08995
Hypothetical protein.
 
     0.588
RAM_21260
COG0477 Permeases of the major facilitator superfamily.
       0.557
RAM_21270
Hypothetical protein.
       0.518
RAM_26800
Hypothetical protein.
  
     0.502
RAM_20100
Hypothetical protein.
  
    0.487
RAM_12385
Hypothetical protein.
 
     0.479
RAM_29050
Hypothetical protein.
  
     0.434
RAM_35225
Wyosine base formation.
 
   
 0.433
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.