STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_21415Hypothetical protein. (223 aa)    
Predicted Functional Partners:
RAM_21420
Hypothetical protein.
 
     0.961
RAM_21425
Iron sulfur protein; COG0723 Rieske Fe-S protein.
       0.744
RAM_21405
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.523
Fes
Enterochelin esterase and related enzyme; COG0627 Predicted esterase.
       0.523
RAM_06830
COG1309 Transcriptional regulator.
  
     0.507
RAM_22185
FHA domain-containing protein; COG1716 FOG: FHA domain.
   
 
 0.480
RAM_25405
FHA domain-containing protein; COG1716 FOG: FHA domain.
   
 
 0.480
RAM_17740
COG3689 Predicted membrane protein.
  
     0.473
RAM_08720
COG2380 Uncharacterized protein conserved in bacteria.
  
     0.464
SpoI-3
Anti-sigma regulatory factor, serine/threonine protein kinase; COG3920 Signal transduction histidine kinase.
  
 
   0.462
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.