STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AscDCOG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. (342 aa)    
Predicted Functional Partners:
RAM_22015
Methane monooxygenase.
 
 
 0.995
RAM_22025
Methane/phenol/toluene hydroxylase.
 
  
 0.995
RAM_22030
Monooxygenase component MmoB/DmpM.
 
  
 0.995
Adh-7
COG1064 Zn-dependent alcohol dehydrogenases.
 
  
  0.980
Fpr-2
ferredoxin--NADP+ reductase; COG1146 Ferredoxin.
  
 0.959
FadH
NADPH-dependent 2,4-dienoyl-CoA reductase; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.956
NuoF-2
COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
  
 
 0.951
pyrD
Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.932
Fpr
ferredoxin--NADP+ reductase; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.924
GltD
COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.924
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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