STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_22030Monooxygenase component MmoB/DmpM. (123 aa)    
Predicted Functional Partners:
RAM_22015
Methane monooxygenase.
 
  
 0.997
RAM_22025
Methane/phenol/toluene hydroxylase.
 
 
  0.996
AscD
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
  
 0.995
Adh-7
COG1064 Zn-dependent alcohol dehydrogenases.
 
  
 0.988
RAM_22040
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
     0.940
RAM_22035
Amidohydrolase; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
     0.921
RAM_22005
Fis family transcriptional regulator; COG3284 Transcriptional activator of acetoin/glycerol metabolism.
 
     0.858
GroE
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.
 
     0.723
RAM_22010
Hypothetical protein.
       0.518
RAM_24655
Hypothetical protein.
  
     0.425
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.