STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_22800Hypothetical protein. (153 aa)    
Predicted Functional Partners:
RAM_44600
HD superfamily hydrolase.
  
     0.574
RAM_10220
Peptidase M48; COG0501 Zn-dependent protease with chaperone function.
  
     0.559
RAM_22335
Hypothetical protein.
  
     0.546
RAM_33020
Hypothetical protein.
  
     0.527
RAM_22795
Integral mrmbrane protein.
       0.524
RAM_19345
LamG domain-containing protein receptor.
  
     0.493
RAM_43285
COG4636 Uncharacterized protein conserved in cyanobacteria.
  
     0.488
RAM_34745
COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
     0.461
RAM_43280
COG4636 Uncharacterized protein conserved in cyanobacteria.
  
     0.455
RAM_10575
COG3209 Rhs family protein.
  
     0.450
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.