STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_22810Hypothetical protein. (142 aa)    
Predicted Functional Partners:
RAM_22805
Hypothetical protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
       0.773
MarR-6
COG1846 Transcriptional regulators.
 
     0.619
RAM_37645
Hypothetical protein.
  
     0.594
RAM_24900
Esterase; COG0627 Predicted esterase.
  
     0.584
RAM_28610
Hypothetical protein; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
     0.523
RAM_14190
Hypothetical protein.
  
     0.495
RAM_01100
Hypothetical protein.
  
     0.471
RAM_33735
Hypothetical protein; COG2846 Regulator of cell morphogenesis and NO signaling.
  
     0.465
RAM_01130
Hypothetical protein.
  
     0.451
RAM_07860
Hypothetical protein.
 
     0.437
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.