STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_22935Activating enzyme of the ubiquitin-like protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2. (575 aa)    
Predicted Functional Partners:
RAM_37780
SGNH hydrolase containing a LamG-like domain; COG3209 Rhs family protein.
  
     0.751
RAM_01315
Hypothetical protein.
 
    0.664
RAM_01150
Hypothetical protein.
  
     0.660
RAM_07770
Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family.
  
     0.656
RAM_14860
Hypothetical protein.
 
     0.651
RAM_16950
Hypothetical protein.
 
     0.621
RAM_06795
Hypothetical protein.
 
     0.617
RAM_01435
COG3584 Uncharacterized protein conserved in bacteria.
  
     0.611
MoeZ
Molybdopterin biosynthesis-like protein MoeZ; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
 
 0.594
RAM_21605
Hypothetical protein.
 
     0.571
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.