STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_23095Metallopeptidase; COG0308 Aminopeptidase N. (683 aa)    
Predicted Functional Partners:
RAM_23090
GNAT family acetyltransferase; COG0841 Cation/multidrug efflux pump.
   
   0.594
RAM_21605
Hypothetical protein.
 
 
 0.485
RAM_02620
Metallopeptidase; COG0308 Aminopeptidase N.
  
     0.478
RAM_23100
Hypothetical protein.
       0.471
RAM_34745
COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
 
 
 0.441
RAM_10870
UBA/ThiF-type NAD/FAD binding protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
 
 
 0.436
RAM_11340
Peptidase S8 and S53, subtilisin, kexin, sedolisin; COG1404 Subtilisin-like serine proteases.
 
 
 0.425
AprE
COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
 
 
 0.422
RAM_23225
Hypothetical protein.
 
     0.413
AprE-2
COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
 
 
 0.401
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.