STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_23375Glucan 1,4-alpha-glucosidase; COG3387 Glucoamylase and related glycosyl hydrolases. (741 aa)    
Predicted Functional Partners:
RAM_43985
Glucan 1,4-alpha-glucosidase; COG3387 Glucoamylase and related glycosyl hydrolases.
  
  
 
0.918
GlgP
COG0058 Glucan phosphorylase.
  
 
 0.914
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.909
RAM_13195
Trehalose synthase; COG0366 Glycosidases.
    
 0.907
MalZ-2
Alpha-glucosidase; COG0366 Glycosidases.
    
 0.907
MalZ-3
Alpha-glucosidase; COG0366 Glycosidases.
    
 0.907
MalZ-4
Alpha-glucosidase; COG0366 Glycosidases.
    
 0.907
GlgX
Glycogen debranching enzyme GlgX; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family.
    
 0.905
GlgX-2
Glycogen debranching enzyme GlgX; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family.
    
 0.905
GlgX-3
Glycogen debranching enzyme GlgX; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family.
    
 0.905
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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