Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RAM_01890 | RAM_23380 | RAM_01890 | RAM_23380 | DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.526 |
| RAM_01890 | RAM_23385 | RAM_01890 | RAM_23385 | DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.464 |
| RAM_23380 | RAM_01890 | RAM_23380 | RAM_01890 | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | 0.526 |
| RAM_23380 | RAM_23385 | RAM_23380 | RAM_23385 | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Hypothetical protein. | 0.962 |
| RAM_23380 | RAM_23390 | RAM_23380 | RAM_23390 | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | 0.838 |
| RAM_23380 | RAM_30585 | RAM_23380 | RAM_30585 | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | ATPase; COG0714 MoxR-like ATPases. | 0.424 |
| RAM_23380 | RAM_31625 | RAM_23380 | RAM_31625 | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | 0.530 |
| RAM_23380 | RAM_42030 | RAM_23380 | RAM_42030 | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | 0.624 |
| RAM_23380 | TlyA | RAM_23380 | RAM_30910 | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Hemolysin-like protein; COG1189 Predicted rRNA methylase. | 0.473 |
| RAM_23380 | nadE | RAM_23380 | RAM_06165 | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.441 |
| RAM_23385 | RAM_01890 | RAM_23385 | RAM_01890 | Hypothetical protein. | DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | 0.464 |
| RAM_23385 | RAM_23380 | RAM_23385 | RAM_23380 | Hypothetical protein. | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.962 |
| RAM_23385 | RAM_23390 | RAM_23385 | RAM_23390 | Hypothetical protein. | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | 0.824 |
| RAM_23385 | RAM_31625 | RAM_23385 | RAM_31625 | Hypothetical protein. | DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | 0.466 |
| RAM_23385 | RAM_42030 | RAM_23385 | RAM_42030 | Hypothetical protein. | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase. | 0.581 |
| RAM_23390 | RAM_23380 | RAM_23390 | RAM_23380 | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.838 |
| RAM_23390 | RAM_23385 | RAM_23390 | RAM_23385 | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.824 |
| RAM_23390 | nadE | RAM_23390 | RAM_06165 | NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.596 |
| RAM_30585 | RAM_23380 | RAM_30585 | RAM_23380 | ATPase; COG0714 MoxR-like ATPases. | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.424 |
| RAM_31625 | RAM_23380 | RAM_31625 | RAM_23380 | DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.530 |
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