STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_23385Hypothetical protein. (333 aa)    
Predicted Functional Partners:
RAM_23380
Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
     0.962
RAM_23390
NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
 
     0.824
RAM_27170
Peptidase M41; COG0465 ATP-dependent Zn proteases.
  
 0.730
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.730
RAM_42030
NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase.
 
     0.581
RAM_30590
Hypothetical protein.
  
    0.505
RAM_31625
DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
 
     0.466
RAM_01890
DNA hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
 
     0.464
RAM_11790
Band 7 domain-containing protein; COG2268 Uncharacterized protein conserved in bacteria.
  
  
 0.453
RAM_23180
Alpha-xylosidase; COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.
  
 
  0.446
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.