STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_23385Hypothetical protein. (333 aa)    
Predicted Functional Partners:
RAM_23380
Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
     0.961
RAM_23390
NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
 
     0.824
RAM_27170
Peptidase M41; COG0465 ATP-dependent Zn proteases.
  
 0.688
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.688
RAM_42030
NUDIX hydrolase; COG1051 ADP-ribose pyrophosphatase.
 
     0.583
RAM_30590
Hypothetical protein.
  
  
 0.520
RAM_05840
Peptidase M16; COG0612 Predicted Zn-dependent peptidases.
  
 0.497
RAM_05845
Peptidase M16; COG0612 Predicted Zn-dependent peptidases.
  
 0.497
RAM_32395
Zinc protease; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.
  
 0.497
RAM_11790
Band 7 domain-containing protein; COG2268 Uncharacterized protein conserved in bacteria.
  
 0.465
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.