STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_24290COG0477 Permeases of the major facilitator superfamily. (409 aa)    
Predicted Functional Partners:
RAM_24275
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
    0.774
RAM_24280
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
    0.774
RAM_24285
Kinase; COG4542 Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase.
       0.773
RAM_12145
COG0477 Permeases of the major facilitator superfamily.
  
     0.695
MbtH-3
MbtH protein; COG3251 Uncharacterized protein conserved in bacteria.
  
    0.636
RAM_24265
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.569
RAM_40435
Membrane spanning protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.568
RAM_39480
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.548
PaaH-2
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
    0.535
RAM_24260
COG3321 Polyketide synthase modules and related proteins.
       0.531
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.