STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_24495Hypothetical protein. (297 aa)    
Predicted Functional Partners:
RAM_24490
Hypothetical protein.
       0.773
RAM_44175
Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
  
     0.546
RAM_24480
COG0789 Predicted transcriptional regulators.
       0.521
RAM_24485
Hypothetical protein; COG1413 FOG: HEAT repeat.
       0.521
RAM_38325
Transmembrane transport protein.
  
     0.442
RAM_14410
Hypothetical protein.
  
     0.434
RAM_38570
Cholesterol oxidase; COG2303 Choline dehydrogenase and related flavoproteins.
  
     0.425
RAM_38320
COG1131 ABC-type multidrug transport system, ATPase component.
  
     0.423
XerC
Phage integrase family protein; COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.411
Ndh-2
COG1252 NADH dehydrogenase, FAD-containing subunit.
  
     0.407
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.