STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_24725Hypothetical protein. (177 aa)    
Predicted Functional Partners:
MetE-2
5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase; COG0620 Methionine synthase II (cobalamin-independent).
  
     0.662
RAM_24720
Hypothetical protein.
       0.610
RAM_24730
Chitinase.
  
    0.532
PcaD
3-oxoadipate enol-lactonase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
   
 
  0.505
RAM_35255
ASPIC/UnbV domain-containing protein.
  
     0.490
RAM_35355
Hypothetical protein.
  
     0.490
RAM_24575
Hypothetical protein; COG0372 Citrate synthase.
  
     0.489
RAM_14525
COG2815 Uncharacterized protein conserved in bacteria.
  
     0.479
RAM_35230
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.457
RAM_31505
Hypothetical protein.
  
     0.453
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.