STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_24840COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase. (293 aa)    
Predicted Functional Partners:
PlsC-5
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
  
 0.916
CdsA
Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family.
    
 0.911
PlsC
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.905
PlsC-4
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.905
UgtP
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
     
 0.902
RAM_11780
Hypothetical protein; Belongs to the long-chain O-acyltransferase family.
    
  0.901
RAM_12740
Hypothetical protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins; Belongs to the long-chain O-acyltransferase family.
     
  0.900
PlcC
COG3511 Phospholipase C.
     
  0.900
RAM_22840
Esterase; COG0627 Predicted esterase.
     
  0.900
PlcC-2
COG3511 Phospholipase C.
     
  0.900
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.