CspR protein (Amycolatopsis mediterranei) - STRING interaction network

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CspR

RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. (155 aa)

Predicted Functional Partners:

RAM_25180

0.774

RAM_25170

0.738

RAM_25175

0.736

RAM_25165

0.735

KgtP

0.732

RsmB

0.656

tig

0.601

RAM_09075

0.536

frr

0.508

CysG

0.490

Your Current Organism:

Amycolatopsis mediterranei

NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CspR	CysG	RAM_25185	RAM_25450	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	uroporphyrin-III C-methyltransferase/precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase; COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).	0.490
CspR	KgtP	RAM_25185	RAM_25160	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	MFS transporter alpha-ketoglutarate permease; COG0477 Permeases of the major facilitator superfamily.	0.732
CspR	RAM_09075	RAM_25185	RAM_09075	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	Methyltransferase; COG0742 N6-adenine-specific methylase.	0.536
CspR	RAM_25165	RAM_25185	RAM_25165	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	0.735
CspR	RAM_25170	RAM_25185	RAM_25170	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	COG0642 Signal transduction histidine kinase.	0.738
CspR	RAM_25175	RAM_25185	RAM_25175	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	COG2358 TRAP-type uncharacterized transport system, periplasmic component.	0.736
CspR	RAM_25180	RAM_25185	RAM_25180	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	COG0824 Predicted thioesterase.	0.774
CspR	RsmB	RAM_25185	RAM_14055	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	Ribosomal RNA small subunit methyltransferase B; COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.656
CspR	frr	RAM_25185	RAM_10025	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.	0.508
CspR	tig	RAM_25185	RAM_34585	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.	0.601
CysG	CspR	RAM_25450	RAM_25185	uroporphyrin-III C-methyltransferase/precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase; COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	0.490
KgtP	CspR	RAM_25160	RAM_25185	MFS transporter alpha-ketoglutarate permease; COG0477 Permeases of the major facilitator superfamily.	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	0.732
KgtP	RAM_25165	RAM_25160	RAM_25165	MFS transporter alpha-ketoglutarate permease; COG0477 Permeases of the major facilitator superfamily.	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	0.784
KgtP	RAM_25170	RAM_25160	RAM_25170	MFS transporter alpha-ketoglutarate permease; COG0477 Permeases of the major facilitator superfamily.	COG0642 Signal transduction histidine kinase.	0.789
KgtP	RAM_25175	RAM_25160	RAM_25175	MFS transporter alpha-ketoglutarate permease; COG0477 Permeases of the major facilitator superfamily.	COG2358 TRAP-type uncharacterized transport system, periplasmic component.	0.786
KgtP	RAM_25180	RAM_25160	RAM_25180	MFS transporter alpha-ketoglutarate permease; COG0477 Permeases of the major facilitator superfamily.	COG0824 Predicted thioesterase.	0.732
RAM_09075	CspR	RAM_09075	RAM_25185	Methyltransferase; COG0742 N6-adenine-specific methylase.	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	0.536
RAM_09075	RsmB	RAM_09075	RAM_14055	Methyltransferase; COG0742 N6-adenine-specific methylase.	Ribosomal RNA small subunit methyltransferase B; COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.709
RAM_25165	CspR	RAM_25165	RAM_25185	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	RNA methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	0.735
RAM_25165	KgtP	RAM_25165	RAM_25160	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	MFS transporter alpha-ketoglutarate permease; COG0477 Permeases of the major facilitator superfamily.	0.784

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