STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAM_25220Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). (430 aa)    
Predicted Functional Partners:
RAM_30875
Hypothetical protein.
  
  
 0.724
RAM_25215
COG0500 SAM-dependent methyltransferases.
       0.636
AmiA-2
N-acetylmuramoyl-L-alanine amidase; COG3409 Putative peptidoglycan-binding domain-containing protein.
 
  
 0.622
RAM_05625
Hypothetical protein.
 
  
 0.562
RAM_41380
Hypothetical protein.
  
     0.556
RAM_30125
NLP/P60-family protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
  
0.542
ftsE
Cell division transport system ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
  
 0.538
RAM_04410
Hypothetical protein.
 
     0.536
RAM_05680
Hypothetical protein.
  
  
 0.513
RAM_10665
Hypothetical protein.
  
     0.510
Your Current Organism:
Amycolatopsis mediterranei
NCBI taxonomy Id: 713604
Other names: A. mediterranei S699, Amycolatopsis mediterranei S699, Amycolatopsis mediterranei str. S699, Amycolatopsis mediterranei strain S699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.