STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ223_04975Unannotated protein. (108 aa)    
Predicted Functional Partners:
CJ223_04970
Unannotated protein.
  
 
 0.981
CJ223_04980
Unannotated protein.
 
  
 0.969
CJ223_04985
Unannotated protein.
 
  
 0.964
CJ223_04960
Unannotated protein.
  
  
 0.939
CJ223_00145
Unannotated protein.
  
  
 0.793
GCA_000177755_00140
Unannotated protein.
       0.773
CJ223_04965
Unannotated protein.
       0.773
CJ223_04955
Unannotated protein.
 
     0.751
ackA-2
Unannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.588
CJ223_02475
Unannotated protein.
  
  
 0.558
Your Current Organism:
Lactobacillus iners
NCBI taxonomy Id: 713605
Other names: L. iners AB-1, Lactobacillus iners AB-1, Lactobacillus iners str. AB-1, Lactobacillus iners strain AB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.