STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ223_02190Unannotated protein. (203 aa)    
Predicted Functional Partners:
ecfT
Unannotated protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 
 0.999
CJ223_03110
Unannotated protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 
 0.999
CJ223_03115
Unannotated protein.
   
 
 0.999
CJ223_04915
Unannotated protein.
 
 
 
 0.864
CJ223_02185
Unannotated protein.
 
     0.851
CJ223_05280
Unannotated protein.
   
 
 0.845
CJ223_00070
Unannotated protein.
  
     0.679
CJ223_02585
Unannotated protein.
  
     0.606
CJ223_03565
Unannotated protein.
  
     0.556
CJ223_05945
Unannotated protein.
  
     0.544
Your Current Organism:
Lactobacillus iners
NCBI taxonomy Id: 713605
Other names: L. iners AB-1, Lactobacillus iners AB-1, Lactobacillus iners str. AB-1, Lactobacillus iners strain AB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.