STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HI_1498Predicted coding region HI1498; Hypothetical protein; identified by GeneMark; putative. (139 aa)    
Predicted Functional Partners:
HI_1497
Conserved hypothetical protein; Similar to SP:Q06424 PID:288658 percent identity: 36.21; identified by sequence similarity; putative.
       0.773
HI_1498.1
Predicted coding region HI1498.1; Brute Force ORF; identified by GeneMark; putative.
       0.773
HI_1499
Predicted coding region HI1499; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp27.
       0.752
HI_1500
Predicted coding region HI1500; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp28.
       0.752
HI_1501
Predicted coding region HI1501; Hypothetical protein; identified by GeneMark; putative; To phage Mu protein gp29.
       0.730
HI_1502
Predicted coding region HI1502; Involved in virion morphogenesis.
       0.511
HI_1493
Predicted coding region HI1493; Hypothetical protein; identified by GeneMark; putative.
       0.505
HI_1494
N-acetylmuramoyl-L-alanine amidase; Similar to SP:P20331 PID:15695 percent identity: 43.88; identified by sequence similarity; putative; To phage T3 and T7 N-acetylmuramoyl-L-alanine amidases.
       0.505
HI_1495
Predicted coding region HI1495; Hypothetical protein; identified by GeneMark; putative.
       0.505
HI_1496
Predicted coding region HI1496; Hypothetical protein; identified by GeneMark; putative.
       0.505
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.